Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium atrosepticum |
| Strain | G/39, G39 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 27 |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Beta vulgaris subsp. vulgaris |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1203999 bp
Thymine Count
1202297 bp
Guanine Count
1258344 bp
Cytosine Count
1258759 bp
Genome Length
4923399 bp
Protein-coding Genes
4302 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hth-type transcriptional repressor nsrr | DCX48_09065 | Q6D125 | Negative | 1862034 - 1862459 | 15760.5 |
| hamp domain-containing protein | DCX48_09070 | P02941 | Positive | 1862756 - 1864327 | 57439.0 |
| sensor domain-containing diguanylate cyclase | DCX48_09075 | Q9I3S1 | Positive | 1864858 - 1866690 | 69577.4 |
| type iv pilus twitching motility protein pilt | DCX48_09080 | P52052 | Negative | 1866659 - 1867675 | 36720.2 |
| yggs family pyridoxal phosphate-dependent enzyme | DCX48_09085 | P67082 | Positive | 1867697 - 1868410 | 26236.4 |
| pyrroline-5-carboxylate reductase | DCX48_09090 | P52053 | Positive | 1868504 - 1869325 | 28811.8 |
| yggt family protein | DCX48_09095 | P64566 | Positive | 1869376 - 1869930 | 20836.9 |
| yggu family protein | DCX48_09100 | Q6D118 | Positive | 1869927 - 1870217 | 10621.0 |
| rdgb/ham1 family non-canonical purine ntp pyrophosphatase | DCX48_09105 | Q6D117 | Positive | 1870235 - 1870828 | 20967.9 |
| radical sam family heme chaperone hemw | DCX48_09110 | P52062 | Positive | 1870821 - 1871960 | 42557.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
