Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium atrosepticum |
| Strain | G/39, G39 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 27 |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Beta vulgaris subsp. vulgaris |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1203999 bp
Thymine Count
1202297 bp
Guanine Count
1258344 bp
Cytosine Count
1258759 bp
Genome Length
4923399 bp
Protein-coding Genes
4302 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| esterase | DCX48_09015 | P39298 | Negative | 1851950 - 1852702 | 27252.4 |
| methyl-accepting chemotaxis protein | DCX48_09020 | P07017 | Positive | 1852997 - 1854937 | 70262.2 |
| rna ligase rtcb family protein | DCX48_09025 | P59975 | Positive | 1855172 - 1856293 | 41278.4 |
| peptide chain release factor h | DCX48_09030 | P28369 | Positive | 1856290 - 1856913 | 22987.4 |
| hypothetical protein | DCX48_09035 | Not Available | Negative | 1856950 - 1857411 | 17802.2 |
| hypothetical protein | DCX48_09040 | Not Available | Negative | 1857392 - 1857727 | 12446.7 |
| biofilm peroxide resistance protein bsma | DCX48_09045 | P39297 | Positive | 1857905 - 1858213 | 10895.4 |
| duf350 domain-containing protein | DCX48_09050 | P0AF81 | Negative | 1858277 - 1858675 | 14217.5 |
| 23s rrna (guanosine(2251)-2'-o)-methyltransferase rlmb | DCX48_09055 | Q6D127 | Negative | 1858699 - 1859433 | 26621.4 |
| ribonuclease r | DCX48_09060 | P21499 | Negative | 1859536 - 1861992 | 92902.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
