Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium atrosepticum |
| Strain | G/39, G39 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 27 |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Beta vulgaris subsp. vulgaris |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1203999 bp
Thymine Count
1202297 bp
Guanine Count
1258344 bp
Cytosine Count
1258759 bp
Genome Length
4923399 bp
Protein-coding Genes
4302 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf2502 domain-containing protein | DCX48_08965 | P75616 | Negative | 1844843 - 1845265 | 17230.9 |
| indolepyruvate decarboxylase | DCX48_08970 | P23234 | Positive | 1845557 - 1847224 | 60637.5 |
| iron-sulfur cluster repair protein ytfe | DCX48_08975 | C6DDN6 | Positive | 1847327 - 1847992 | 24933.0 |
| peptidylprolyl isomerase | DCX48_08980 | P0A9L3 | Negative | 1848101 - 1848721 | 22313.4 |
| opacity-associated protein a | DCX48_08985 | P39310 | Positive | 1849124 - 1849837 | 26957.3 |
| duf488 family protein | DCX48_08990 | P76243 | Negative | 1849834 - 1850196 | 14035.7 |
| 50s ribosomal protein l9 | DCX48_08995 | Q6D138 | Negative | 1850324 - 1850776 | 15773.0 |
| 30s ribosomal protein s18 | DCX48_09000 | Q6D137 | Negative | 1850818 - 1851045 | 8957.94 |
| primosomal replication protein n | DCX48_09005 | Q6D136 | Negative | 1851050 - 1851370 | 11505.0 |
| 30s ribosomal protein s6 | DCX48_09010 | Q6D135 | Negative | 1851376 - 1851768 | 15038.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
