Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium atrosepticum |
| Strain | G/39, G39 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 27 |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Beta vulgaris subsp. vulgaris |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1203999 bp
Thymine Count
1202297 bp
Guanine Count
1258344 bp
Cytosine Count
1258759 bp
Genome Length
4923399 bp
Protein-coding Genes
4302 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bifunctional d-glycero-beta-d-manno-heptose-7-phosphate kinase/d-glycero-beta-d-manno-heptose 1-phosphate adenylyltransferase hlde | DCX48_08865 | Q6D164 | Negative | 1818034 - 1819470 | 50905.4 |
| bifunctional | DCX48_08870 | Q6D163 | Negative | 1819714 - 1822569 | 107915.0 |
| inorganic triphosphatase | DCX48_08875 | P30871 | Negative | 1822622 - 1823959 | 50677.3 |
| sh3 domain-containing protein | DCX48_08880 | P0ADU0 | Positive | 1824306 - 1824926 | 23284.0 |
| multifunctional cca addition/repair protein | DCX48_08885 | Q6D160 | Positive | 1825035 - 1826279 | 46369.6 |
| undecaprenyl-diphosphate phosphatase | DCX48_08890 | Q6D159 | Negative | 1826339 - 1827157 | 30157.3 |
| bifunctional dihydroneopterin aldolase/7,8-dihydroneopterin epimerase | DCX48_08895 | P0AC17 | Negative | 1827465 - 1827818 | 13203.9 |
| glycerol-3-phosphate 1-o-acyltransferase plsy | DCX48_08900 | Q6D157 | Positive | 1827926 - 1828561 | 22721.2 |
| methyl-accepting chemotaxis protein | DCX48_08905 | P02941 | Negative | 1828640 - 1830226 | 56338.8 |
| inorganic diphosphatase | DCX48_08910 | P0A7B0 | Positive | 1830474 - 1831004 | 19740.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
