Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium atrosepticum |
| Strain | G/39, G39 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 27 |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Beta vulgaris subsp. vulgaris |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1203999 bp
Thymine Count
1202297 bp
Guanine Count
1258344 bp
Cytosine Count
1258759 bp
Genome Length
4923399 bp
Protein-coding Genes
4302 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2-dehydro-3-deoxyglucarate aldolase | DCX48_08815 | A8AQ14 | Negative | 1804423 - 1805193 | 27658.1 |
| glucarate dehydratase | DCX48_08820 | P0AES3 | Negative | 1805263 - 1806603 | 49193.9 |
| glucarate dehydratase | DCX48_08825 | Q46915 | Negative | 1806641 - 1807993 | 49660.6 |
| mfs transporter | DCX48_08830 | Q46916 | Negative | 1808598 - 1809950 | 49041.8 |
| galactarate dehydratase | DCX48_08835 | P39829 | Positive | 1810511 - 1812085 | 56222.3 |
| pas domain-containing methyl-accepting chemotaxis protein | DCX48_08840 | P50466 | Positive | 1812796 - 1814286 | 54106.1 |
| hypothetical protein | DCX48_08845 | Not Available | Positive | 1814461 - 1814865 | 14465.0 |
| hypothetical protein | DCX48_08850 | Not Available | Positive | 1815063 - 1815419 | 12821.6 |
| cytoplasmic protein | DCX48_08855 | P0AD41 | Negative | 1815512 - 1815733 | 8548.67 |
| nad-dependent dna ligase liga | DCX48_08860 | Q6D165 | Negative | 1815832 - 1817877 | 74447.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
