Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium atrosepticum |
| Strain | G/39, G39 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 27 |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Beta vulgaris subsp. vulgaris |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1203999 bp
Thymine Count
1202297 bp
Guanine Count
1258344 bp
Cytosine Count
1258759 bp
Genome Length
4923399 bp
Protein-coding Genes
4302 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 7-carboxy-7-deazaguanine synthase quee | DCX48_08715 | P64555 | Negative | 1775901 - 1776572 | 24852.8 |
| mbl fold metallo-hydrolase | DCX48_08720 | O34760 | Positive | 1776891 - 1777874 | 35559.7 |
| lysr family transcriptional regulator | DCX48_08725 | P10183 | Negative | 1777890 - 1778822 | 35147.3 |
| mbl fold metallo-hydrolase | DCX48_08730 | O34760 | Positive | 1778921 - 1779910 | 35878.9 |
| sdr family oxidoreductase | DCX48_08735 | P52037 | Positive | 1779919 - 1780665 | 26384.6 |
| glycoside hydrolase family 105 protein | DCX48_08740 | O31521 | Negative | 1781018 - 1782157 | 44141.6 |
| mfs transporter | DCX48_08745 | P74168 | Negative | 1782201 - 1783760 | 57894.4 |
| lysr family transcriptional regulator | DCX48_08750 | P52659 | Negative | 1784062 - 1784952 | 32528.5 |
| coniferyl aldehyde dehydrogenase | DCX48_08755 | O86447 | Positive | 1785121 - 1786539 | 51407.5 |
| type 1 glutamine amidotransferase domain-containing protein | DCX48_08760 | Q5AF03 | Positive | 1786587 - 1787264 | 24353.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
