Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium atrosepticum |
| Strain | G/39, G39 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 27 |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Beta vulgaris subsp. vulgaris |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1203999 bp
Thymine Count
1202297 bp
Guanine Count
1258344 bp
Cytosine Count
1258759 bp
Genome Length
4923399 bp
Protein-coding Genes
4302 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| faa hydrolase family protein | DCX48_00990 | Q6GLT8 | Positive | 85699 - 86583 | 31932.9 |
| [citrate (pro-3s)-lyase] ligase | DCX48_00995 | P77390 | Positive | 86673 - 87737 | 40370.5 |
| citrate lyase acyl carrier protein | DCX48_01000 | Q6D421 | Positive | 87761 - 88051 | 10474.7 |
| citrate (pro-3s)-lyase subunit beta | DCX48_01005 | P17725 | Positive | 88051 - 88926 | 32063.7 |
| citrate lyase subunit alpha | DCX48_01010 | P45413 | Positive | 88980 - 90509 | 55096.0 |
| citrate lyase holo-[acyl-carrier protein] synthase | DCX48_01015 | B7NLX4 | Positive | 90536 - 91063 | 19393.2 |
| triphosphoribosyl-dephospho-coa synthase citg | DCX48_01020 | Q6D425 | Positive | 91041 - 91946 | 32530.0 |
| flagellar brake protein | DCX48_01025 | C6DF90 | Positive | 92344 - 93099 | 28448.3 |
| hypothetical protein | DCX48_01030 | Not Available | Positive | 93511 - 93753 | 8221.61 |
| apc family permease | DCX48_01035 | P0AA48 | Positive | 93743 - 95113 | 49742.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
