Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium atrosepticum |
| Strain | G/39, G39 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 27 |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Beta vulgaris subsp. vulgaris |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1203999 bp
Thymine Count
1202297 bp
Guanine Count
1258344 bp
Cytosine Count
1258759 bp
Genome Length
4923399 bp
Protein-coding Genes
4302 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lactonase family protein | DCX48_08465 | A8GBC1 | Negative | 1721804 - 1722964 | 41412.7 |
| mfs transporter | DCX48_08470 | Q8X4V6 | Positive | 1723134 - 1724354 | 42912.6 |
| branched-chain amino acid abc transporter permease | DCX48_08475 | P76630 | Positive | 1724524 - 1725255 | 25807.2 |
| l-valine transporter subunit ygah | DCX48_08480 | P43667 | Positive | 1725252 - 1725593 | 12232.5 |
| transcriptional repressor mpra | DCX48_08485 | P0ACS1 | Positive | 1725770 - 1726285 | 19560.6 |
| multidrug efflux mfs transporter periplasmic adaptor subunit emra | DCX48_08490 | P27303 | Positive | 1726560 - 1727735 | 42994.2 |
| multidrug efflux mfs transporter subunit emrb | DCX48_08495 | P0AEJ1 | Positive | 1727753 - 1729288 | 55562.5 |
| nupc/nupg family nucleoside cnt transporter | DCX48_08500 | P0AFF3 | Positive | 1729498 - 1730682 | 42636.9 |
| duf3574 domain-containing protein | DCX48_08505 | Not Available | Negative | 1730881 - 1731330 | 16130.5 |
| trna/rrna methyltransferase | DCX48_08510 | P0AGJ6 | Negative | 1731400 - 1732551 | 42316.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
