Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium atrosepticum |
| Strain | G/39, G39 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 27 |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Beta vulgaris subsp. vulgaris |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1203999 bp
Thymine Count
1202297 bp
Guanine Count
1258344 bp
Cytosine Count
1258759 bp
Genome Length
4923399 bp
Protein-coding Genes
4302 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gamma-glutamyltransferase | DCX48_08415 | A6T9C8 | Positive | 1711556 - 1713142 | 56193.1 |
| oxalurate catabolism protein hpxx | DCX48_08420 | Not Available | Positive | 1713168 - 1713359 | 7351.94 |
| integrase | DCX48_08425 | Q936X3 | Positive | 1713356 - 1714759 | 50378.6 |
| oxalurate catabolism protein hpxz | DCX48_08430 | Not Available | Positive | 1714890 - 1715276 | 14369.0 |
| voc family protein | DCX48_08435 | Not Available | Negative | 1715323 - 1715715 | 14408.8 |
| proline/glycine betaine abc transporter atp-binding protein prov | DCX48_08440 | E0SCY1 | Positive | 1716384 - 1717586 | 44137.6 |
| proline/glycine betaine abc transporter permease prow | DCX48_08445 | P14176 | Positive | 1717579 - 1718760 | 41726.4 |
| proline/glycine betaine abc transporter substrate-binding protein prox | DCX48_08450 | E0SCY3 | Positive | 1718998 - 1720002 | 36563.2 |
| alpha/beta hydrolase | DCX48_08455 | P53750 | Negative | 1720105 - 1720977 | 32869.3 |
| hypothetical protein | DCX48_08460 | Not Available | Positive | 1721086 - 1721667 | 21693.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
