Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium atrosepticum |
| Strain | G/39, G39 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 27 |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Beta vulgaris subsp. vulgaris |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1203999 bp
Thymine Count
1202297 bp
Guanine Count
1258344 bp
Cytosine Count
1258759 bp
Genome Length
4923399 bp
Protein-coding Genes
4302 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| xanthine phosphoribosyltransferase | DCX48_08265 | Q6D1I0 | Negative | 1680370 - 1680828 | 17015.6 |
| beta-ala-his dipeptidase | DCX48_08270 | P15288 | Positive | 1681271 - 1682731 | 52652.3 |
| dna polymerase iv | DCX48_08275 | Q6D1H8 | Negative | 1682795 - 1683853 | 40192.6 |
| xre family transcriptional regulator | DCX48_08280 | Not Available | Negative | 1683929 - 1684729 | 29810.6 |
| class i sam-dependent methyltransferase | DCX48_08285 | P30866 | Positive | 1684972 - 1685745 | 28611.1 |
| murein l,d-transpeptidase | DCX48_08290 | P0AAA0 | Positive | 1686139 - 1686873 | 27969.6 |
| class ii glutamine amidotransferase | DCX48_08295 | Q47147 | Negative | 1686844 - 1687611 | 28948.6 |
| d-sedoheptulose 7-phosphate isomerase | DCX48_08300 | Q6D1H3 | Negative | 1687704 - 1688285 | 20790.8 |
| acyl-coa dehydrogenase | DCX48_08305 | Q8ZBY6 | Positive | 1688627 - 1691074 | 89171.3 |
| hnh nuclease family protein | DCX48_08310 | P0A1S9 | Positive | 1691173 - 1691523 | 13307.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
