Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium atrosepticum |
| Strain | G/39, G39 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 27 |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Beta vulgaris subsp. vulgaris |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1203999 bp
Thymine Count
1202297 bp
Guanine Count
1258344 bp
Cytosine Count
1258759 bp
Genome Length
4923399 bp
Protein-coding Genes
4302 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| integrase | DCX48_08215 | P37326 | Negative | 1671394 - 1671589 | 7312.93 |
| hypothetical protein | DCX48_08220 | Not Available | Positive | 1672091 - 1672783 | 25545.6 |
| integrase | DCX48_08225 | P03835 | Positive | 1672884 - 1674181 | 49146.2 |
| integrase | DCX48_08230 | P04890 | Positive | 1674182 - 1674625 | 16381.6 |
| Trna-thr | Not Available | Not Available | Positive | 1674640 - 1674715 | Not Available |
| hypothetical protein | DCX48_08240 | Not Available | Positive | 1675243 - 1675662 | 15566.8 |
| glutamate-5-semialdehyde dehydrogenase | DCX48_08245 | C6DCX4 | Negative | 1675933 - 1677186 | 44761.7 |
| glutamate 5-kinase | DCX48_08250 | Q6D1I3 | Negative | 1677197 - 1678300 | 39039.9 |
| sigma factor-binding protein crl | DCX48_08255 | Q6D1I2 | Negative | 1678424 - 1678798 | 14427.3 |
| esterase frsa | DCX48_08260 | Q6D1I1 | Negative | 1678903 - 1680153 | 47065.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
