Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium atrosepticum |
| Strain | G/39, G39 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 27 |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Beta vulgaris subsp. vulgaris |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1203999 bp
Thymine Count
1202297 bp
Guanine Count
1258344 bp
Cytosine Count
1258759 bp
Genome Length
4923399 bp
Protein-coding Genes
4302 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| histidinol-phosphate transaminase | DCX48_00940 | Q6D410 | Negative | 72067 - 73140 | 39347.3 |
| histidinol dehydrogenase | DCX48_00945 | Q6D411 | Negative | 73137 - 74465 | 46854.8 |
| atp phosphoribosyltransferase | DCX48_00950 | Q6D412 | Negative | 74471 - 75370 | 33526.0 |
| his operon leader peptide | DCX48_00955 | Not Available | Negative | 75517 - 75564 | 1915.24 |
| sdr family oxidoreductase | DCX48_00960 | P0AD13 | Positive | 75843 - 76685 | 30245.3 |
| hamp domain-containing protein | DCX48_00965 | P21822 | Negative | 76766 - 78706 | 70069.8 |
| hamp domain-containing protein | DCX48_00970 | P07017 | Negative | 79011 - 80945 | 69934.8 |
| response regulator | DCX48_00975 | P52688 | Negative | 81405 - 82106 | 26449.8 |
| sensor histidine kinase | DCX48_00980 | P52687 | Negative | 82190 - 83791 | 59535.6 |
| 2-hydroxycarboxylate transporter family protein | DCX48_00985 | P94363 | Positive | 84211 - 85581 | 47987.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
