Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium atrosepticum |
| Strain | G/39, G39 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 27 |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Beta vulgaris subsp. vulgaris |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1203999 bp
Thymine Count
1202297 bp
Guanine Count
1258344 bp
Cytosine Count
1258759 bp
Genome Length
4923399 bp
Protein-coding Genes
4302 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DCX48_08015 | Not Available | Negative | 1621366 - 1621827 | 18254.5 |
| hypothetical protein | DCX48_08020 | Not Available | Negative | 1621848 - 1622168 | 11619.4 |
| integrase | DCX48_08025 | E0SGL7 | Negative | 1622202 - 1622297 | 3214.88 |
| hypothetical protein | DCX48_08030 | Not Available | Positive | 1622617 - 1622805 | 6022.86 |
| integrase | DCX48_08035 | Q9KD44 | Negative | 1623035 - 1624489 | 52560.3 |
| xre family transcriptional regulator | DCX48_08040 | O34419 | Positive | 1624588 - 1624989 | 15200.4 |
| type i toxin-antitoxin system syme family toxin | DCX48_08045 | C4ZT30 | Positive | 1625061 - 1625285 | 8102.81 |
| hypothetical protein | DCX48_08050 | Not Available | Negative | 1625379 - 1625666 | 10750.0 |
| integrase | DCX48_08055 | E0SGL7 | Negative | 1625975 - 1630477 | 169182.0 |
| duf4123 domain-containing protein | DCX48_08060 | Not Available | Negative | 1630498 - 1631415 | 34561.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
