Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium atrosepticum |
| Strain | G/39, G39 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 27 |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Beta vulgaris subsp. vulgaris |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1203999 bp
Thymine Count
1202297 bp
Guanine Count
1258344 bp
Cytosine Count
1258759 bp
Genome Length
4923399 bp
Protein-coding Genes
4302 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| integrase | DCX48_07965 | E0SGL7 | Negative | 1617225 - 1617693 | 17471.1 |
| integrase | DCX48_07970 | C0Q7I4 | Positive | 1617692 - 1617868 | 6511.82 |
| hypothetical protein | DCX48_07975 | Not Available | Negative | 1617954 - 1618238 | 10505.5 |
| integrase | DCX48_07980 | Q07833 | Negative | 1618336 - 1618557 | 7941.5 |
| hypothetical protein | DCX48_07985 | Not Available | Positive | 1618537 - 1618671 | 5364.58 |
| integrase | DCX48_07990 | Not Available | Positive | 1619012 - 1619194 | 5817.6 |
| integrase | DCX48_07995 | Q8XTL6 | Negative | 1619552 - 1619743 | 7289.61 |
| integrase | DCX48_08000 | Not Available | Negative | 1619773 - 1620579 | 30330.5 |
| hypothetical protein | DCX48_08005 | O34419 | Positive | 1620749 - 1620994 | 9255.25 |
| type i toxin-antitoxin system syme family toxin | DCX48_08010 | C4ZT30 | Positive | 1621066 - 1621290 | 8086.75 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
