Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium atrosepticum |
| Strain | G/39, G39 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 27 |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Beta vulgaris subsp. vulgaris |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1203999 bp
Thymine Count
1202297 bp
Guanine Count
1258344 bp
Cytosine Count
1258759 bp
Genome Length
4923399 bp
Protein-coding Genes
4302 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| integrase | DCX48_07915 | Not Available | Positive | 1606501 - 1608098 | 58115.4 |
| mfs transporter | DCX48_07920 | Q8X4V6 | Negative | 1608358 - 1609554 | 41194.5 |
| lysr family transcriptional regulator | DCX48_07925 | P43011 | Negative | 1609676 - 1610557 | 32011.8 |
| glutaredoxin 2 | DCX48_07930 | P0AC61 | Positive | 1610774 - 1611409 | 23535.7 |
| bacteriocin immunity protein | DCX48_07935 | Not Available | Negative | 1611508 - 1611930 | 15636.5 |
| glycosyltransferase | DCX48_07940 | Q8KHE4 | Negative | 1612062 - 1613402 | 48898.7 |
| taud/tfda family dioxygenase | DCX48_07945 | D3V9Q5 | Negative | 1613414 - 1614253 | 31458.2 |
| paerucumarin biosynthesis protein pvca | DCX48_07950 | D3V9Q4 | Negative | 1614336 - 1615301 | 36466.6 |
| hypothetical protein | DCX48_07955 | E0SGL7 | Negative | 1615921 - 1616208 | 11047.2 |
| hypothetical protein | DCX48_07960 | Not Available | Negative | 1616565 - 1616849 | 10817.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
