Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium atrosepticum |
| Strain | G/39, G39 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 27 |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Beta vulgaris subsp. vulgaris |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1203999 bp
Thymine Count
1202297 bp
Guanine Count
1258344 bp
Cytosine Count
1258759 bp
Genome Length
4923399 bp
Protein-coding Genes
4302 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-arg | Not Available | Not Available | Positive | 1598063 - 1598139 | Not Available |
| Trna-ser | Not Available | Not Available | Positive | 1598148 - 1598240 | Not Available |
| carbon storage regulator | DCX48_07875 | Q6D1T1 | Negative | 1598534 - 1598719 | 6839.35 |
| alanine--trna ligase | DCX48_07880 | Q6D1T0 | Negative | 1599039 - 1601666 | 95979.5 |
| recombination regulator recx | DCX48_07885 | Q6D1S9 | Negative | 1601804 - 1602292 | 18845.2 |
| recombinase reca | DCX48_07890 | Q6D1S8 | Negative | 1602338 - 1603411 | 38286.1 |
| nicotinamide-nucleotide amidase | DCX48_07895 | P0A6G4 | Negative | 1603519 - 1604013 | 17424.7 |
| hypothetical protein | DCX48_07900 | Q9CP15 | Negative | 1604249 - 1604584 | 13163.3 |
| srpbcc family protein | DCX48_07905 | Not Available | Positive | 1605064 - 1605552 | 18509.3 |
| marc family naat transporter | DCX48_07910 | A8AGR9 | Positive | 1605635 - 1606309 | 24133.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
