Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium atrosepticum |
| Strain | G/39, G39 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 27 |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Beta vulgaris subsp. vulgaris |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1203999 bp
Thymine Count
1202297 bp
Guanine Count
1258344 bp
Cytosine Count
1258759 bp
Genome Length
4923399 bp
Protein-coding Genes
4302 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| outer membrane protein assembly factor bamd | DCX48_07765 | P0AC04 | Positive | 1581187 - 1581921 | 27370.5 |
| ribosome-associated translation inhibitor raia | DCX48_07770 | P0AD51 | Positive | 1582244 - 1582585 | 12679.2 |
| bifunctional chorismate mutase/prephenate dehydratase | DCX48_07775 | P0A9J9 | Positive | 1582936 - 1584096 | 43088.8 |
| bifunctional chorismate mutase/prephenate dehydrogenase | DCX48_07780 | P07023 | Negative | 1584197 - 1585318 | 42209.2 |
| 3-deoxy-7-phosphoheptulonate synthase | DCX48_07785 | P00888 | Negative | 1585325 - 1586398 | 39099.5 |
| two-component system response regulator btsr | DCX48_07790 | Q8ZBV2 | Positive | 1586647 - 1587363 | 27105.2 |
| duf2799 domain-containing protein | DCX48_07795 | P11289 | Positive | 1587412 - 1587759 | 12881.0 |
| class i sam-dependent methyltransferase | DCX48_07800 | Not Available | Positive | 1588018 - 1588956 | 35074.8 |
| 50s ribosomal protein l19 | DCX48_07805 | Q6D1U1 | Negative | 1589219 - 1589566 | 13077.9 |
| trna (guanosine(37)-n1)-methyltransferase trmd | DCX48_07810 | Q6D1U0 | Negative | 1589629 - 1590384 | 28395.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
