Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium atrosepticum |
| Strain | G/39, G39 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 27 |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Beta vulgaris subsp. vulgaris |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1203999 bp
Thymine Count
1202297 bp
Guanine Count
1258344 bp
Cytosine Count
1258759 bp
Genome Length
4923399 bp
Protein-coding Genes
4302 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hydroxyacylglutathione hydrolase | DCX48_07715 | Q6D1V5 | Positive | 1570069 - 1570824 | 28299.7 |
| murein transglycosylase d | DCX48_07720 | P0AEZ8 | Positive | 1570895 - 1572259 | 50167.0 |
| endonuclease/exonuclease/phosphatase family protein | DCX48_07725 | A4W6U9 | Negative | 1572329 - 1573117 | 29579.0 |
| Trna-asp | Not Available | Not Available | Positive | 1573346 - 1573422 | Not Available |
| 5s ribosomal rna | Not Available | Not Available | Positive | 1573475 - 1573590 | Not Available |
| 16s ribosomal rna | Not Available | Not Available | Positive | 1575022 - 1576109 | Not Available |
| atp-dependent chaperone clpb | DCX48_07745 | Q74X11 | Negative | 1576597 - 1579173 | 95643.9 |
| polyphenol oxidase | DCX48_07750 | A0A384KG77 | Negative | 1579307 - 1580032 | 25918.9 |
| 23s rrna pseudouridine(1911/1915/1917) synthase rlud | DCX48_07755 | Q8ZBV7 | Negative | 1580075 - 1581052 | 36671.2 |
| integrase | DCX48_07760 | Q8ZBV7 | Negative | 1580964 - 1581160 | 7545.18 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
