Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium atrosepticum |
| Strain | G/39, G39 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 27 |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Beta vulgaris subsp. vulgaris |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1203999 bp
Thymine Count
1202297 bp
Guanine Count
1258344 bp
Cytosine Count
1258759 bp
Genome Length
4923399 bp
Protein-coding Genes
4302 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pantoate--beta-alanine ligase | DCX48_07615 | Q6D1X5 | Positive | 1552873 - 1553727 | 31709.4 |
| aspartate 1-decarboxylase | DCX48_07620 | Q6D1X4 | Positive | 1553745 - 1554125 | 13860.5 |
| abc transporter permease | DCX48_07625 | P0AFN8 | Negative | 1554188 - 1554958 | 28645.2 |
| abc transporter atp-binding protein | DCX48_07630 | P36879 | Negative | 1554955 - 1555893 | 34608.3 |
| carbonate dehydratase | DCX48_07635 | P61517 | Positive | 1556156 - 1556797 | 24334.2 |
| hypoxanthine phosphoribosyltransferase | DCX48_07640 | O33799 | Negative | 1556857 - 1557393 | 20175.4 |
| gnat family n-acetyltransferase | DCX48_07645 | Q1XDU5 | Positive | 1557543 - 1557977 | 15659.9 |
| abc transporter atp-binding protein | DCX48_07650 | Q4K681 | Negative | 1557978 - 1559063 | 40183.4 |
| iron abc transporter permease | DCX48_07655 | P71338 | Negative | 1559068 - 1560753 | 61374.9 |
| hypothetical protein | DCX48_07660 | P0AA96 | Positive | 1561123 - 1561470 | 12918.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
