Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium atrosepticum |
| Strain | G/39, G39 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 27 |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Beta vulgaris subsp. vulgaris |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1203999 bp
Thymine Count
1202297 bp
Guanine Count
1258344 bp
Cytosine Count
1258759 bp
Genome Length
4923399 bp
Protein-coding Genes
4302 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fe3+-hydroxamate abc transporter atp-binding protein fhuc | DCX48_07565 | P07821 | Negative | 1540422 - 1541219 | 28449.6 |
| bifunctional glycosyl transferase/transpeptidase | DCX48_07570 | P02919 | Negative | 1541534 - 1544008 | 92030.0 |
| atp-dependent helicase hrpb | DCX48_07575 | P37024 | Negative | 1544111 - 1546591 | 91851.7 |
| rna 2',3'-cyclic phosphodiesterase | DCX48_07580 | P37025 | Positive | 1546684 - 1547214 | 19919.1 |
| dna/rna nuclease sfsa | DCX48_07585 | Q6D1Y1 | Positive | 1547235 - 1547939 | 26479.7 |
| rna polymerase-binding protein dksa | DCX48_07590 | P0ABS3 | Positive | 1548208 - 1548663 | 17386.7 |
| trna glutamyl-q(34) synthetase gluqrs | DCX48_07595 | Q6D1X9 | Positive | 1548791 - 1549759 | 36472.1 |
| polynucleotide adenylyltransferase | DCX48_07600 | Q8ZRQ8 | Positive | 1549898 - 1551310 | 54658.8 |
| 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase | DCX48_07605 | P26281 | Positive | 1551310 - 1551807 | 18681.3 |
| 3-methyl-2-oxobutanoate hydroxymethyltransferase | DCX48_07610 | Q6D1X6 | Positive | 1551924 - 1552718 | 28644.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
