Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium atrosepticum |
| Strain | G/39, G39 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 27 |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Beta vulgaris subsp. vulgaris |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1203999 bp
Thymine Count
1202297 bp
Guanine Count
1258344 bp
Cytosine Count
1258759 bp
Genome Length
4923399 bp
Protein-coding Genes
4302 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dgtpase | DCX48_07515 | A8G9V4 | Negative | 1529232 - 1530743 | 58952.1 |
| 5'-methylthioadenosine/s-adenosylhomocysteine nucleosidase | DCX48_07520 | Q6D1Z4 | Positive | 1530973 - 1531671 | 24460.5 |
| vitamin b12 abc transporter substrate-binding protein btuf | DCX48_07525 | Q6D1Z3 | Positive | 1531675 - 1532514 | 30955.2 |
| hypothetical protein | DCX48_07530 | Not Available | Positive | 1532733 - 1533011 | 9786.76 |
| iron-sulfur cluster insertion protein erpa | DCX48_07535 | Q6D1Z1 | Negative | 1533271 - 1533618 | 12198.3 |
| glutamate-1-semialdehyde 2,1-aminomutase | DCX48_07540 | Q6D1Z0 | Positive | 1533886 - 1535166 | 45379.8 |
| plp-dependent aminotransferase family protein | DCX48_07545 | P39389 | Negative | 1535244 - 1536704 | 54027.2 |
| lyse family translocator | DCX48_07550 | Q57L56 | Positive | 1536840 - 1537430 | 21548.4 |
| fe(3+)-hydroxamate abc transporter permease fhub | DCX48_07555 | P06972 | Negative | 1537468 - 1539486 | 71491.9 |
| fe(3+)-hydroxamate abc transporter substrate-binding protein fhud | DCX48_07560 | P07822 | Negative | 1539479 - 1540405 | 34303.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
