Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium atrosepticum |
| Strain | G/39, G39 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 27 |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Beta vulgaris subsp. vulgaris |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1203999 bp
Thymine Count
1202297 bp
Guanine Count
1258344 bp
Cytosine Count
1258759 bp
Genome Length
4923399 bp
Protein-coding Genes
4302 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nadh:flavin oxidoreductase | DCX48_07465 | P32382 | Negative | 1518196 - 1519302 | 39596.7 |
| aldo/keto reductase | DCX48_07470 | Q00049 | Positive | 1519490 - 1520539 | 38331.6 |
| tetr family transcriptional regulator | DCX48_07475 | P0ACT0 | Positive | 1520624 - 1521205 | 21140.0 |
| doxx family protein | DCX48_07480 | P54720 | Positive | 1521496 - 1521930 | 15479.4 |
| sulfate abc transporter atp-binding protein | DCX48_07485 | Q6D201 | Negative | 1522011 - 1523003 | 37388.0 |
| sulfate abc transporter permease subunit cysw | DCX48_07490 | P0AEB1 | Negative | 1522993 - 1523874 | 32447.5 |
| sulfate abc transporter permease subunit cyst | DCX48_07495 | P41032 | Negative | 1523887 - 1524699 | 29226.9 |
| sulfate abc transporter substrate-binding protein | DCX48_07500 | P0AG78 | Negative | 1524856 - 1525866 | 37077.0 |
| cdar family transcriptional regulator | DCX48_07505 | P37047 | Negative | 1526186 - 1527343 | 43088.4 |
| serine endoprotease degp | DCX48_07510 | P26982 | Negative | 1527576 - 1529042 | 50657.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
