Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium atrosepticum |
| Strain | G/39, G39 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 27 |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Beta vulgaris subsp. vulgaris |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1203999 bp
Thymine Count
1202297 bp
Guanine Count
1258344 bp
Cytosine Count
1258759 bp
Genome Length
4923399 bp
Protein-coding Genes
4302 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| autonomous glycyl radical cofactor grca | DCX48_07415 | Q6D209 | Negative | 1512864 - 1513247 | 14377.1 |
| uracil-dna glycosylase | DCX48_07420 | Q6D208 | Positive | 1513657 - 1514343 | 25418.2 |
| Trna-ala | Not Available | Not Available | Positive | 1514492 - 1514567 | Not Available |
| Trna-ala | Not Available | Not Available | Positive | 1514615 - 1514690 | Not Available |
| alpha/beta hydrolase | DCX48_07435 | O32102 | Positive | 1514941 - 1515825 | 32244.5 |
| glutamate--trna ligase | DCX48_07440 | Q6D206 | Negative | 1515899 - 1517314 | 53370.0 |
| Trna-val | Not Available | Not Available | Positive | 1517606 - 1517681 | Not Available |
| Trna-val | Not Available | Not Available | Positive | 1517740 - 1517815 | Not Available |
| Trna-val | Not Available | Not Available | Positive | 1517883 - 1517958 | Not Available |
| Trna-lys | Not Available | Not Available | Positive | 1517966 - 1518041 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
