Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium atrosepticum |
| Strain | G/39, G39 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 27 |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Beta vulgaris subsp. vulgaris |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1203999 bp
Thymine Count
1202297 bp
Guanine Count
1258344 bp
Cytosine Count
1258759 bp
Genome Length
4923399 bp
Protein-coding Genes
4302 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf1007 family protein | DCX48_07215 | P44137 | Negative | 1454740 - 1455399 | 24697.7 |
| 3-phenylpropionate mfs transporter | DCX48_07220 | Q47142 | Negative | 1455444 - 1456604 | 42019.6 |
| serine hydroxymethyltransferase | DCX48_07225 | Q6D246 | Negative | 1457063 - 1458316 | 45287.2 |
| no-inducible flavohemoprotein | DCX48_07230 | Q6D245 | Positive | 1458677 - 1459867 | 44342.6 |
| rhamnogalacturonan acetylesterase | DCX48_07235 | O31523 | Positive | 1460467 - 1462125 | 60207.0 |
| pectinesterase a | DCX48_07240 | P0C1A9 | Positive | 1462228 - 1463334 | 40353.1 |
| nitrogen regulatory protein p-ii | DCX48_07245 | P11671 | Negative | 1463424 - 1463762 | 12448.1 |
| two-component system response regulator glrr | DCX48_07250 | P0AFU4 | Negative | 1463922 - 1465259 | 49237.6 |
| two-component system qseef-associated lipoprotein qseg | DCX48_07255 | P0AD45 | Negative | 1465256 - 1466065 | 30615.1 |
| hamp domain-containing histidine kinase | DCX48_07260 | P52101 | Negative | 1466101 - 1467537 | 54452.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
