Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium atrosepticum |
| Strain | G/39, G39 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 27 |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Beta vulgaris subsp. vulgaris |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1203999 bp
Thymine Count
1202297 bp
Guanine Count
1258344 bp
Cytosine Count
1258759 bp
Genome Length
4923399 bp
Protein-coding Genes
4302 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| murr/rpir family transcriptional regulator | DCX48_07115 | P44540 | Positive | 1435648 - 1436436 | 29170.9 |
| enhanced serine sensitivity protein sseb | DCX48_07120 | P0AFZ1 | Negative | 1436515 - 1437309 | 29501.9 |
| aminopeptidase pepb | DCX48_07125 | Q6D266 | Negative | 1437404 - 1438714 | 47136.6 |
| fe-s cluster assembly protein iscx | DCX48_07130 | P0C0M0 | Negative | 1438987 - 1439187 | 7685.94 |
| isc system 2fe-2s type ferredoxin | DCX48_07135 | P0A9R5 | Negative | 1439209 - 1439544 | 12362.6 |
| fe-s protein assembly chaperone hsca | DCX48_07140 | Q6D263 | Negative | 1439546 - 1441396 | 65765.7 |
| co-chaperone hscb | DCX48_07145 | Q6D262 | Negative | 1441471 - 1441989 | 20366.0 |
| iron-sulfur cluster assembly protein isca | DCX48_07150 | Q6D261 | Negative | 1442061 - 1442384 | 11378.4 |
| fe-s cluster assembly scaffold iscu | DCX48_07155 | P0ACD6 | Negative | 1442465 - 1442851 | 13759.3 |
| iscs subfamily cysteine desulfurase | DCX48_07160 | Q6D259 | Negative | 1442875 - 1444089 | 44922.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
