Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium atrosepticum |
| Strain | G/39, G39 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 27 |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Beta vulgaris subsp. vulgaris |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1203999 bp
Thymine Count
1202297 bp
Guanine Count
1258344 bp
Cytosine Count
1258759 bp
Genome Length
4923399 bp
Protein-coding Genes
4302 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutamine-hydrolyzing gmp synthase | DCX48_07015 | Q6D288 | Negative | 1411913 - 1413490 | 58475.1 |
| integrase | DCX48_07020 | Not Available | Negative | 1413597 - 1415149 | 57458.9 |
| exodeoxyribonuclease vii large subunit | DCX48_07025 | Q6D286 | Positive | 1415236 - 1416624 | 52392.9 |
| peptidase m4 family protein | DCX48_07030 | Q99132 | Positive | 1416862 - 1417905 | 38805.5 |
| hypothetical protein | DCX48_07035 | Not Available | Positive | 1417902 - 1418246 | 12724.0 |
| arac family transcriptional regulator | DCX48_07040 | Q46855 | Negative | 1418393 - 1419283 | 32495.5 |
| sdr family oxidoreductase | DCX48_07045 | P51831 | Positive | 1419444 - 1420199 | 26872.0 |
| aec family transporter | DCX48_07050 | O27435 | Negative | 1420303 - 1421262 | 34379.1 |
| ribosome biogenesis gtpase der | DCX48_07055 | Q6D280 | Negative | 1421355 - 1422842 | 55283.5 |
| outer membrane protein assembly factor bamb | DCX48_07060 | Q7CJM5 | Negative | 1422987 - 1424168 | 42573.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
