Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium atrosepticum |
| Strain | G/39, G39 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 27 |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Beta vulgaris subsp. vulgaris |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1203999 bp
Thymine Count
1202297 bp
Guanine Count
1258344 bp
Cytosine Count
1258759 bp
Genome Length
4923399 bp
Protein-coding Genes
4302 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| maltoporin | DCX48_06765 | Q6D2C3 | Positive | 1349780 - 1351087 | 48924.6 |
| sn-glycerol-3-phosphate abc transporter atp-binding protein ugpc | DCX48_06770 | Q8Z1U0 | Negative | 1351590 - 1352672 | 39646.2 |
| extracellular solute-binding protein | DCX48_06775 | O07009 | Positive | 1353166 - 1354398 | 44609.8 |
| sugar abc transporter permease | DCX48_06780 | O32261 | Positive | 1354486 - 1355802 | 48850.6 |
| sugar abc transporter permease | DCX48_06785 | O07011 | Positive | 1355815 - 1356663 | 31249.1 |
| galactosidase | DCX48_06790 | Q65CX5 | Positive | 1356699 - 1357913 | 44922.5 |
| beta-galactosidase | DCX48_06795 | C8WV58 | Positive | 1358142 - 1360202 | 77795.5 |
| pts glucose transporter subunit iibc | DCX48_06800 | P37439 | Positive | 1360355 - 1360696 | 12496.1 |
| d-lactate dehydrogenase | DCX48_06805 | P06149 | Negative | 1360828 - 1362585 | 66166.8 |
| aldo/keto reductase | DCX48_06810 | O05408 | Negative | 1362656 - 1363621 | 35051.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
