Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium atrosepticum |
| Strain | G/39, G39 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 27 |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Beta vulgaris subsp. vulgaris |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1203999 bp
Thymine Count
1202297 bp
Guanine Count
1258344 bp
Cytosine Count
1258759 bp
Genome Length
4923399 bp
Protein-coding Genes
4302 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| translation initiation factor if-1 | DCX48_00790 | A4W8Q8 | Negative | 32908 - 33126 | 8236.07 |
| leucyl/phenylalanyl-trna--protein transferase | DCX48_00795 | Q6D3U2 | Negative | 33242 - 33946 | 26382.4 |
| cysteine/glutathione abc transporter atp-binding protein/permease cydc | DCX48_00800 | P23886 | Negative | 33980 - 35719 | 63521.1 |
| cysteine/glutathione abc transporter permease/atp-binding protein cydd | DCX48_00805 | P29018 | Negative | 35719 - 37485 | 64710.1 |
| thioredoxin-disulfide reductase | DCX48_00810 | P0A9P5 | Negative | 37722 - 38684 | 34411.0 |
| leucine-responsive transcriptional regulator lrp | DCX48_00815 | P0ACJ2 | Positive | 39269 - 39763 | 18887.9 |
| cell division protein ftsk | DCX48_00820 | Q8ZGC7 | Positive | 39878 - 43288 | 124582.0 |
| outer membrane lipoprotein chaperone lola | DCX48_00825 | Q6D3U8 | Positive | 43501 - 44112 | 22539.2 |
| replication-associated recombination protein a | DCX48_00830 | P0AAZ6 | Positive | 44120 - 45463 | 49264.6 |
| serine--trna ligase | DCX48_00835 | Q6D3V0 | Positive | 45567 - 46862 | 48779.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
