Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium atrosepticum |
| Strain | G/39, G39 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 27 |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Beta vulgaris subsp. vulgaris |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1203999 bp
Thymine Count
1202297 bp
Guanine Count
1258344 bp
Cytosine Count
1258759 bp
Genome Length
4923399 bp
Protein-coding Genes
4302 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| flagellar biosynthesis protein flha | DCX48_05290 | Q56887 | Negative | 1018776 - 1020860 | 75189.9 |
| flagellar type iii secretion system protein flhb | DCX48_05295 | Q56886 | Negative | 1020853 - 1022004 | 42403.5 |
| protein phosphatase chez | DCX48_05300 | Q7CIX9 | Negative | 1022250 - 1022894 | 23832.4 |
| chemotaxis protein chey | DCX48_05305 | Q93P00 | Negative | 1022904 - 1023293 | 14226.2 |
| chemotaxis response regulator protein-glutamate methylesterase | DCX48_05310 | Q6D6I7 | Negative | 1023332 - 1024384 | 38000.8 |
| protein-glutamate o-methyltransferase cher | DCX48_05315 | P21824 | Negative | 1024384 - 1025256 | 33073.8 |
| hamp domain-containing protein | DCX48_05320 | P21822 | Negative | 1025793 - 1027478 | 60482.4 |
| chemotaxis protein chew | DCX48_05325 | P21821 | Negative | 1027614 - 1028111 | 17927.9 |
| chemotaxis protein chea | DCX48_05330 | P21813 | Negative | 1028143 - 1030137 | 71852.0 |
| motility protein motb | DCX48_05335 | P55892 | Negative | 1030171 - 1031226 | 38447.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
