Ruminiclostridium papyrosolvens

rod

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Eubacteriales

Family

Oscillospiraceae

Genus

Ruminiclostridium

Description

Ruminiclostridium papyrosolvens is a Gram-negative bacterium characterized by its rod shape. This species is notable for possessing a single replicon, which is a defining feature of its genetic organization. The bacterium is cataloged under the accession number CP119677.1, indicating its presence in genomic databases for further research and reference. As an organism within the Ruminiclostridium genus, Ruminiclostridium papyrosolvens is likely involved in the anaerobic degradation of complex carbohydrates, particularly in the digestive systems of ruminant animals. This capability suggests a significant ecological role in nutrient cycling, particularly in the breakdown of plant materials, which contributes to the energy supply of herbivorous hosts. The understanding of Ruminiclostridium papyrosolvens, including its Gram-negative status and rod shape, may provide insights into its metabolic pathways and interactions within microbial communities. Its single replicon can also be indicative of its evolutionary adaptations to specific environmental niches, particularly those associated with the digestive processes in ruminants. Further studies on this bacterium could enhance knowledge of its ecological impact and potential applications in biotechnology, particularly in enhancing the efficiency of digestion and fermentation in livestock.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderEubacteriales
FamilyOscillospiraceae
GenusRuminiclostridium
SpeciesRuminiclostridium papyrosolvens
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Ruminiclostridium papyrosolvens , Complete Genome

Gene Summary

Adenine Count

1579931 bp

Thymine Count

1583127 bp

Guanine Count

930967 bp

Cytosine Count

933836 bp

Genome Length

5027861 bp

Protein-coding Genes

4220 genes

Non-Coding Genes

194 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
30s ribosomal protein s21P0092_14040B8I406Negative3127776 - 31279526850.38
histidine triad nucleotide-binding proteinP0092_14045O66536Negative3128136 - 312848012528.1
alanine--trna ligaseP0092_14050A3DKB6Negative3128513 - 313115297599.7
had family hydrolaseP0092_14055O67359Negative3131496 - 313216124423.2
bifunctional glutamate n-acetyltransferase/amino-acid acetyltransferase argjP0092_14060Q8R7B9Positive3132351 - 313355342590.0
chemotaxis protein chewP0092_14065O83453Positive3133624 - 313404315766.1
methyl-accepting chemotaxis proteinP0092_14070P39214Negative3134104 - 313613475033.7
psts family phosphate abc transporter substrate-binding proteinP0092_14075P39665Negative3136221 - 313716234328.6
pyridoxamine 5'-phosphate oxidase family proteinP0092_14080Not AvailableNegative3137362 - 313783518103.0
phosphate abc transporter permease pstaP0092_14085P46340Negative3137891 - 313874530919.2

Displaying genes 2831 – 2840 of 4414 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

4 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000989GlycerolC3H8O3Chemical structure of Glycerol56-81-5
Average92.0938Da
Monoisotopic92.04734412Da
BASm0002051D-fructoseC6H12O6Chemical structure of D-fructose57-48-7
Average180.1559Da
Monoisotopic180.0633881Da
BASm0014032Acetic acidC2H4O2Chemical structure of Acetic acid64-19-7
Average60.052Da
Monoisotopic60.021129372Da
BASm0039640Streptococcus constellatusNot available7296-56-2Not available

Displaying 1–4 of 4 metabolites

Health Effects

No health effects information available for this bacterium.