Paucilactobacillus oligofermentans AMKR18, AV56

Kingdom

Bacillati

Phylum

Bacillota

Class

Bacilli

Order

Lactobacillales

Family

Lactobacillaceae

Genus

Paucilactobacillus

Description

Paucilactobacillus oligofermentans AMKR18, AV56 is characterized by its possession of two replicons, which may influence its genetic stability and adaptability. The organism is cataloged under two specific accessions: LN898144.1 and LN898145.1. These accessions provide a reference for genomic studies and facilitate further research into its genetics and potential applications. Paucilactobacillus oligofermentans is part of the Lactobacillus genus and is known for its role in fermentation processes, which can have implications for food production and preservation. Its traits suggest a potential for beneficial interactions in various ecological niches, particularly in environments where fermentation is essential for nutrient cycling and energy flow. The presence of two replicons may indicate a level of genomic organization that allows for a versatile metabolic capability, enabling it to thrive in diverse conditions. This characteristic could be particularly advantageous in complex microbial communities, where competition for resources is prevalent. Understanding the specific roles and interactions of Paucilactobacillus oligofermentans within its ecosystem could provide insights into its contributions to microbial dynamics and biotechnological applications. Overall, the distinct traits of Paucilactobacillus oligofermentans AMKR18, AV56 highlight its potential significance in fermentation and ecological interactions, warranting further investigation into its functional roles in microbial communities.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassBacilli
OrderLactobacillales
FamilyLactobacillaceae
GenusPaucilactobacillus
SpeciesPaucilactobacillus oligofermentans
StrainAMKR18, AV56

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Paucilactobacillus oligofermentans AMKR18, AV56, Complete Genome

Gene Summary

Adenine Count

578876 bp

Thymine Count

580527 bp

Guanine Count

319369 bp

Cytosine Count

322901 bp

Genome Length

1801673 bp

Protein-coding Genes

1680 genes

Non-Coding Genes

114 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
dna replication and repair protein recfLACOL_0004A5VHF6Positive3100 - 421842324.8
dna gyrase subunit b gyrbLACOL_0005Q839Z1Positive4266 - 620971657.2
dna gyrase subunit a gyraLACOL_0006Q9L7Q5Positive6235 - 877293628.0
30s ribosomal protein s6 rpsfLACOL_0007Q890K2Positive8972 - 926811313.2
single-stranded dna-binding protein ssbaLACOL_0008Q890K1Positive9309 - 982718624.1
30s ribosomal protein s18 rpsrLACOL_0009Q38ZR6Positive9855 - 100979383.52
arc-like dna binding domain-containing proteinLACOL_0010Not AvailablePositive10224 - 1055012321.6
putative stomatin/prohibitin-family proteinLACOL_0011O26788Positive10561 - 1138529845.6
diguanylate cyclase and phosphoesteraseLACOL_0012A0A0H3GCG4Positive11530 - 1355476206.8
50s ribosomal protein l9 rpliLACOL_0013Q03I50Positive13561 - 1401316562.2

Displaying genes 61 – 70 of 1856 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.