Paucilactobacillus oligofermentans AMKR18, AV56

Kingdom

Bacillati

Phylum

Bacillota

Class

Bacilli

Order

Lactobacillales

Family

Lactobacillaceae

Genus

Paucilactobacillus

Description

Paucilactobacillus oligofermentans AMKR18, AV56 is characterized by its possession of two replicons, which may influence its genetic stability and adaptability. The organism is cataloged under two specific accessions: LN898144.1 and LN898145.1. These accessions provide a reference for genomic studies and facilitate further research into its genetics and potential applications. Paucilactobacillus oligofermentans is part of the Lactobacillus genus and is known for its role in fermentation processes, which can have implications for food production and preservation. Its traits suggest a potential for beneficial interactions in various ecological niches, particularly in environments where fermentation is essential for nutrient cycling and energy flow. The presence of two replicons may indicate a level of genomic organization that allows for a versatile metabolic capability, enabling it to thrive in diverse conditions. This characteristic could be particularly advantageous in complex microbial communities, where competition for resources is prevalent. Understanding the specific roles and interactions of Paucilactobacillus oligofermentans within its ecosystem could provide insights into its contributions to microbial dynamics and biotechnological applications. Overall, the distinct traits of Paucilactobacillus oligofermentans AMKR18, AV56 highlight its potential significance in fermentation and ecological interactions, warranting further investigation into its functional roles in microbial communities.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassBacilli
OrderLactobacillales
FamilyLactobacillaceae
GenusPaucilactobacillus
SpeciesPaucilactobacillus oligofermentans
StrainAMKR18, AV56

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Paucilactobacillus oligofermentans AMKR18, AV56, Complete Genome

Gene Summary

Adenine Count

578876 bp

Thymine Count

580527 bp

Guanine Count

319369 bp

Cytosine Count

322901 bp

Genome Length

1801673 bp

Protein-coding Genes

1680 genes

Non-Coding Genes

114 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
30s ribosomal protein s16 rpspLACOL_0884Q88WJ5Positive894450 - 89472510537.9
ribosome maturation factor rimmLACOL_0885Q1WU93Positive894919 - 89542219032.3
trna (guanine-n(1)-)-methyltransferase trmdLACOL_0886Q03RU7Positive895424 - 89617628275.6
50s ribosomal protein l19 rplsLACOL_0887Q88WJ1Positive896323 - 89667613612.7
putative dna-binding proteinLACOL_0888Not AvailableNegative896732 - 8969869797.92
putative dipeptidase aLACOL_0889Q48841Negative897008 - 89842053039.8
4-oxalocrotonate tautomerase family proteinLACOL_0890Q88WD0Positive898561 - 8987466628.09
diaminopimelate decarboxylaseLACOL_0891P23630Positive898824 - 90013147712.8
glycerol kinase 2LACOL_0892A5VKE8Positive900158 - 90166355660.1
cof family proteinLACOL_0893P70947Negative901710 - 90252230117.5

Displaying genes 911 – 920 of 1856 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.