Paucilactobacillus oligofermentans AMKR18, AV56

Kingdom

Bacillati

Phylum

Bacillota

Class

Bacilli

Order

Lactobacillales

Family

Lactobacillaceae

Genus

Paucilactobacillus

Description

Paucilactobacillus oligofermentans AMKR18, AV56 is characterized by its possession of two replicons, which may influence its genetic stability and adaptability. The organism is cataloged under two specific accessions: LN898144.1 and LN898145.1. These accessions provide a reference for genomic studies and facilitate further research into its genetics and potential applications. Paucilactobacillus oligofermentans is part of the Lactobacillus genus and is known for its role in fermentation processes, which can have implications for food production and preservation. Its traits suggest a potential for beneficial interactions in various ecological niches, particularly in environments where fermentation is essential for nutrient cycling and energy flow. The presence of two replicons may indicate a level of genomic organization that allows for a versatile metabolic capability, enabling it to thrive in diverse conditions. This characteristic could be particularly advantageous in complex microbial communities, where competition for resources is prevalent. Understanding the specific roles and interactions of Paucilactobacillus oligofermentans within its ecosystem could provide insights into its contributions to microbial dynamics and biotechnological applications. Overall, the distinct traits of Paucilactobacillus oligofermentans AMKR18, AV56 highlight its potential significance in fermentation and ecological interactions, warranting further investigation into its functional roles in microbial communities.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassBacilli
OrderLactobacillales
FamilyLactobacillaceae
GenusPaucilactobacillus
SpeciesPaucilactobacillus oligofermentans
StrainAMKR18, AV56

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Paucilactobacillus oligofermentans AMKR18, AV56, Complete Genome

Gene Summary

Adenine Count

578876 bp

Thymine Count

580527 bp

Guanine Count

319369 bp

Cytosine Count

322901 bp

Genome Length

1801673 bp

Protein-coding Genes

1680 genes

Non-Coding Genes

114 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
l-lactate dehydrogenaseLACOL_1517Q03DZ7Positive1558295 - 155925133824.4
cystathionine beta-synthase domain-containing proteinLACOL_1518Not AvailablePositive1559511 - 156015224072.4
mrna interferase ndoaLACOL_1519P96622Negative1560256 - 156061813431.5
alanine racemase alrLACOL_1520A5VI51Negative1560691 - 156180040376.7
holo-[acyl-carrier-protein] synthase acpsLACOL_1521A5VI50Negative1561806 - 156216212971.4
dead box atp-dependent rna helicase srmbLACOL_1522Q9Z6C9Negative1562279 - 156389858597.5
putative udp-n-acetylmuramoyl-tripeptide--d-alanyl-d-alanine ligaseLACOL_1523P96613Negative1564033 - 156540350295.5
putative protease htpxLACOL_1524Q03T13Negative1565554 - 156644732594.0
protein lemaLACOL_1525A8AVK0Negative1566473 - 156703020797.0
low molecular weight phosphotyrosine protein phosphatase family proteinLACOL_1526O35016Positive1567139 - 156759717201.7

Displaying genes 1581 – 1590 of 1856 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.