Paucilactobacillus oligofermentans AMKR18, AV56

Kingdom

Bacillati

Phylum

Bacillota

Class

Bacilli

Order

Lactobacillales

Family

Lactobacillaceae

Genus

Paucilactobacillus

Description

Paucilactobacillus oligofermentans AMKR18, AV56 is characterized by its possession of two replicons, which may influence its genetic stability and adaptability. The organism is cataloged under two specific accessions: LN898144.1 and LN898145.1. These accessions provide a reference for genomic studies and facilitate further research into its genetics and potential applications. Paucilactobacillus oligofermentans is part of the Lactobacillus genus and is known for its role in fermentation processes, which can have implications for food production and preservation. Its traits suggest a potential for beneficial interactions in various ecological niches, particularly in environments where fermentation is essential for nutrient cycling and energy flow. The presence of two replicons may indicate a level of genomic organization that allows for a versatile metabolic capability, enabling it to thrive in diverse conditions. This characteristic could be particularly advantageous in complex microbial communities, where competition for resources is prevalent. Understanding the specific roles and interactions of Paucilactobacillus oligofermentans within its ecosystem could provide insights into its contributions to microbial dynamics and biotechnological applications. Overall, the distinct traits of Paucilactobacillus oligofermentans AMKR18, AV56 highlight its potential significance in fermentation and ecological interactions, warranting further investigation into its functional roles in microbial communities.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassBacilli
OrderLactobacillales
FamilyLactobacillaceae
GenusPaucilactobacillus
SpeciesPaucilactobacillus oligofermentans
StrainAMKR18, AV56

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Paucilactobacillus oligofermentans AMKR18, AV56, Complete Genome

Gene Summary

Adenine Count

578876 bp

Thymine Count

580527 bp

Guanine Count

319369 bp

Cytosine Count

322901 bp

Genome Length

1801673 bp

Protein-coding Genes

1680 genes

Non-Coding Genes

114 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
tyrosine recombinase xerdLACOL_0964Q93C64Negative980989 - 98187633958.5
s1 domain-containing proteinLACOL_0965O06747Negative981880 - 98275533171.9
pyruvate kinaseLACOL_0966P34038Negative982916 - 98433751228.8
putative transaldolaseLACOL_0967A4XL36Negative984538 - 98525425785.7
dna polymerase iii subunit alphaLACOL_0968O34623Negative985272 - 988628126098.0
putative membrane proteinLACOL_0969Not AvailablePositive988865 - 9890626931.76
peptidase tLACOL_0970B2GC19Negative989105 - 99034646380.1
nif3 family proteinLACOL_0971Q97PK0Negative990351 - 99116330101.1
s-adenosylmethionine-dependent methyltransferaseLACOL_0972P54471Negative991165 - 99185725533.4
bcr/cfla family drug resistance transporterLACOL_0973P96709Positive991998 - 99317041808.9

Displaying genes 991 – 1000 of 1856 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.