Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxydohydrogena |
| Strain | Z-1062 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas carboxydohydrogena Z-1062
Accession NumberCP113162.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3090 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| Tail protein | AFIC_002075 | O48448 | - | 2153794 - 2154204 | 14723.3 |
| Putative phage head-tail adaptor | AFIC_002076 | Not Available | - | 2154215 - 2154535 | 11926.2 |
| Dna packaging/head-tail-connector | AFIC_002077 | Not Available | - | 2154532 - 2155101 | 19942.3 |
| trypsin-like serine protease | AFIC_002078 | D8MIA2 | + | 2155158 - 2155916 | 25430.7 |
| porin | AFIC_002079 | Not Available | + | 2155952 - 2156215 | 9174.97 |
| hypothetical protein | AFIC_002080 | Not Available | - | 2156225 - 2156428 | 7283.79 |
| hypothetical protein | AFIC_002081 | Not Available | - | 2156544 - 2156795 | 9038.3 |
| Major capsid protein | AFIC_002082 | Not Available | - | 2156939 - 2158195 | 45030.1 |
| Putative prohead protease | AFIC_002083 | P49860 | - | 2158207 - 2158698 | 18272.3 |
| hypothetical protein | AFIC_002084 | Not Available | - | 2158756 - 2158935 | 6782.42 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
