Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxydohydrogena |
| Strain | Z-1062 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
614120 bp
Thymine Count
614391 bp
Guanine Count
1021703 bp
Cytosine Count
1021226 bp
Genome Length
3271440 bp
Protein-coding Genes
3090 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| metal/formaldehyde-sensitive transcriptional repressor | AFIC_000868 | P55757 | Negative | 906742 - 907020 | 10133.4 |
| metal-sensitive transcriptional regulator | AFIC_000869 | O32222 | Negative | 907194 - 907478 | 10872.2 |
| heavy metal translocating p-type atpase | AFIC_000870 | Q5ZWR1 | Positive | 907515 - 909944 | 85016.6 |
| lysr family transcriptional regulator | AFIC_000871 | P30864 | Negative | 910252 - 911175 | 34604.3 |
| thioredoxin-disulfide reductase | AFIC_000872 | Q4ULP1 | Negative | 911178 - 912143 | 34247.0 |
| lrp/asnc family transcriptional regulator | AFIC_000873 | P56901 | Positive | 912419 - 912892 | 17386.0 |
| sulfite exporter taue/safe family protein | AFIC_000874 | P29942 | Positive | 912901 - 913659 | 26432.1 |
| doxx family protein | AFIC_000875 | P44069 | Negative | 913665 - 914066 | 14232.8 |
| hypothetical protein | AFIC_000876 | Not Available | Negative | 914186 - 914563 | 13375.7 |
| transcription elongation factor grea | AFIC_000877 | Q20ZR6 | Negative | 914576 - 915052 | 17079.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
