Pseudomonas carboxydohydrogena Z-1062

Rodaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Nitrobacteraceae

Genus

Afipia

Description

Pseudomonas carboxydohydrogena Z-1062 is a Gram-negative bacterium characterized by its rod-like shape and the presence of flagella, which facilitate motility. This organism is notable for having a single replicon, indicating a streamlined genetic structure that may contribute to its adaptability in various environments. The genomic sequence of this strain is available under the accession number CP113162.1, providing a resource for further research into its genetic and metabolic capabilities. As a member of the Pseudomonas genus, Pseudomonas carboxydohydrogena Z-1062 likely plays a role in carbon cycling, given its name, which suggests an association with carbon monoxide metabolism. This trait is significant in ecological contexts where carbon monoxide is produced, such as in the microbial degradation of organic matter or in certain industrial processes. The ability of this bacterium to utilize carbon monoxide may position it as a potential agent for bioremediation, particularly in environments contaminated with carbon-based pollutants. Overall, the characteristics of Pseudomonas carboxydohydrogena Z-1062 underscore its potential ecological contributions, particularly in carbon cycling and environmental cleanup. Further studies focusing on its metabolic pathways and ecological interactions could elucidate its role in microbial communities and environmental sustainability.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyNitrobacteraceae
GenusAfipia
SpeciesAfipia carboxydohydrogena
StrainZ-1062

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Pseudomonas carboxydohydrogena Z-1062
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas carboxydohydrogena Z-1062, Complete Genome

Gene Summary

Adenine Count

614120 bp

Thymine Count

614391 bp

Guanine Count

1021703 bp

Cytosine Count

1021226 bp

Genome Length

3271440 bp

Protein-coding Genes

3090 genes

Non-Coding Genes

71 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
duf2312 domain-containing proteinAFIC_000828B6JC05Positive866225 - 86649410255.3
duf882 domain-containing proteinAFIC_000829P0AB08Negative866699 - 86822254840.4
l,d-transpeptidase family proteinAFIC_000830P22525Negative868572 - 87069876651.2
sigma-54 dependent transcriptional regulatorAFIC_000831P14375Negative870945 - 87244154046.4
m3 family oligoendopeptidaseAFIC_000832O31605Positive872609 - 87445668224.5
abrb/maze/spovt family dna-binding domain-containing proteinAFIC_000833Not AvailablePositive874541 - 8748019597.71
type ii toxin-antitoxin system death-on-curing family toxinAFIC_000834Q06259Positive874798 - 87518114146.0
aa3-type cytochrome c oxidase subunit ivAFIC_000835Not AvailablePositive875288 - 8754405541.63
re/si-specific nad(p)(+) transhydrogenase subunit alphaAFIC_000836Q2RSB2Positive875560 - 87668739271.6
proton-translocating transhydrogenase family proteinAFIC_000837Q2RSB3Positive876699 - 87701911490.5

Displaying genes 851 – 860 of 3161 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.