Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxydohydrogena |
| Strain | Z-1062 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
614120 bp
Thymine Count
614391 bp
Guanine Count
1021703 bp
Cytosine Count
1021226 bp
Genome Length
3271440 bp
Protein-coding Genes
3090 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase coabc | AFIC_000048 | Q5E8M6 | Positive | 51969 - 53390 | 50112.6 |
| dutp diphosphatase | AFIC_000049 | B6JCQ3 | Positive | 53387 - 53845 | 15752.1 |
| pas-domain containing protein | AFIC_000050 | Q9RQQ9 | Positive | 53999 - 56482 | 90492.7 |
| trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex atpase subunit type 1 tsae | AFIC_000051 | Q9A2M2 | Positive | 56479 - 58008 | 55710.6 |
| pilz domain-containing protein | AFIC_000052 | Not Available | Positive | 58111 - 58440 | 12305.9 |
| nucleotidyltransferase family protein | AFIC_000053 | Q9A2M1 | Positive | 58589 - 59311 | 25803.3 |
| double-strand break repair protein addb | AFIC_000054 | Q1RIZ9 | Positive | 59377 - 62541 | 115273.0 |
| double-strand break repair helicase adda | AFIC_000055 | A5D1P3 | Positive | 62538 - 66032 | 126928.0 |
| thioredoxin | AFIC_000056 | P10473 | Positive | 66154 - 66510 | 12624.5 |
| bifunctional folylpolyglutamate synthase/dihydrofolate synthase | AFIC_000057 | Q05865 | Negative | 66574 - 67902 | 47258.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
