Pseudomonas carboxydohydrogena Z-1062

Rodaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Nitrobacteraceae

Genus

Afipia

Description

Pseudomonas carboxydohydrogena Z-1062 is a Gram-negative bacterium characterized by its rod-like shape and the presence of flagella, which facilitate motility. This organism is notable for having a single replicon, indicating a streamlined genetic structure that may contribute to its adaptability in various environments. The genomic sequence of this strain is available under the accession number CP113162.1, providing a resource for further research into its genetic and metabolic capabilities. As a member of the Pseudomonas genus, Pseudomonas carboxydohydrogena Z-1062 likely plays a role in carbon cycling, given its name, which suggests an association with carbon monoxide metabolism. This trait is significant in ecological contexts where carbon monoxide is produced, such as in the microbial degradation of organic matter or in certain industrial processes. The ability of this bacterium to utilize carbon monoxide may position it as a potential agent for bioremediation, particularly in environments contaminated with carbon-based pollutants. Overall, the characteristics of Pseudomonas carboxydohydrogena Z-1062 underscore its potential ecological contributions, particularly in carbon cycling and environmental cleanup. Further studies focusing on its metabolic pathways and ecological interactions could elucidate its role in microbial communities and environmental sustainability.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyNitrobacteraceae
GenusAfipia
SpeciesAfipia carboxydohydrogena
StrainZ-1062

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Pseudomonas carboxydohydrogena Z-1062
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas carboxydohydrogena Z-1062, Complete Genome

Gene Summary

Adenine Count

614120 bp

Thymine Count

614391 bp

Guanine Count

1021703 bp

Cytosine Count

1021226 bp

Genome Length

3271440 bp

Protein-coding Genes

3090 genes

Non-Coding Genes

71 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
yihy/virulence factor brkb family proteinAFIC_000668O34437Negative705916 - 70680031503.8
twin transmembrane helix small proteinAFIC_000669Not AvailablePositive706952 - 7071467101.33
cob(i)yrinic acid a,c-diamide adenosyltransferaseAFIC_000670P64804Positive707159 - 70773120611.7
electron transfer flavoprotein subunit beta/fixa family proteinAFIC_000671P53575Positive707854 - 70860026279.0
fad-binding proteinAFIC_000672P53573Positive708600 - 70954432513.8
3-hydroxybutyryl-coa dehydrogenaseAFIC_000673Q45223Positive709654 - 71053531791.8
putative motility proteinAFIC_000674Not AvailablePositive710609 - 7108006297.6
duf1428 domain-containing proteinAFIC_000675P0AAQ8Negative710797 - 71115613808.2
tlpa family protein disulfide reductaseAFIC_000676P43221Negative711236 - 71189523321.4
argininosuccinate lyaseAFIC_000677P59613Positive711969 - 71336650316.4

Displaying genes 691 – 700 of 3161 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.