Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxydohydrogena |
| Strain | Z-1062 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas carboxydohydrogena Z-1062
Accession NumberCP113162.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3090 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| trna (n6-isopentenyl adenosine(37)-c2)-methylthiotransferase miab | AFIC_000018 | B6JCT6 | + | 18694 - 20130 | 51826.1 |
| phoh family protein | AFIC_000019 | P46343 | + | 20123 - 21181 | 38052.5 |
| rrna maturation rnase ybey | AFIC_000020 | Q07V70 | + | 21186 - 21680 | 17907.0 |
| hemolysin family protein | AFIC_000021 | A8GPR9 | + | 21682 - 22788 | 39859.3 |
| apolipoprotein n-acyltransferase | AFIC_000022 | P61036 | + | 22785 - 24389 | 58049.1 |
| helix-turn-helix domain-containing protein | AFIC_000023 | A6U5H5 | + | 24610 - 25020 | 14737.7 |
| trna (guanosine(46)-n7)-methyltransferase trmb | AFIC_000024 | Q07V74 | + | 25162 - 25863 | 26280.6 |
| duf2336 domain-containing protein | AFIC_000025 | Not Available | - | 25881 - 26957 | 38624.0 |
| ribosome maturation factor rimp | AFIC_000026 | B6JCS7 | + | 27326 - 28114 | 28500.2 |
| transcription termination factor nusa | AFIC_000027 | Q92HF4 | + | 28118 - 29740 | 59284.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
