Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxydohydrogena |
| Strain | Z-1062 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
614120 bp
Thymine Count
614391 bp
Guanine Count
1021703 bp
Cytosine Count
1021226 bp
Genome Length
3271440 bp
Protein-coding Genes
3090 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| malonyl-coa decarboxylase | AFIC_000008 | P12617 | Positive | 10383 - 11759 | 50498.3 |
| hypothetical protein | AFIC_000009 | Not Available | Negative | 11779 - 12108 | 11903.4 |
| adenosine kinase | AFIC_000010 | Q55480 | Negative | 12252 - 13253 | 35045.7 |
| murein biosynthesis integral membrane protein murj | AFIC_000011 | P56882 | Positive | 13402 - 14961 | 54891.6 |
| tryptophan--trna ligase | AFIC_000012 | Q89W91 | Positive | 15013 - 16050 | 37915.4 |
| cytochrome ubiquinol oxidase subunit i | AFIC_000013 | Q9UMS0 | Positive | 16219 - 16470 | 9111.92 |
| nifu family protein | AFIC_000014 | Q8SY96 | Positive | 16474 - 16782 | 10829.9 |
| trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex dimerization subunit type 1 tsab | AFIC_000015 | Q87RD1 | Positive | 16915 - 17592 | 23670.5 |
| ribosomal protein s18-alanine n-acetyltransferase | AFIC_000016 | P44305 | Positive | 17592 - 18092 | 18037.7 |
| transcriptional repressor | AFIC_000017 | O07315 | Positive | 18117 - 18566 | 17209.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
