Pseudomonas carboxydohydrogena Z-1062

Rodaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Nitrobacteraceae

Genus

Afipia

Description

Pseudomonas carboxydohydrogena Z-1062 is a Gram-negative bacterium characterized by its rod-like shape and the presence of flagella, which facilitate motility. This organism is notable for having a single replicon, indicating a streamlined genetic structure that may contribute to its adaptability in various environments. The genomic sequence of this strain is available under the accession number CP113162.1, providing a resource for further research into its genetic and metabolic capabilities. As a member of the Pseudomonas genus, Pseudomonas carboxydohydrogena Z-1062 likely plays a role in carbon cycling, given its name, which suggests an association with carbon monoxide metabolism. This trait is significant in ecological contexts where carbon monoxide is produced, such as in the microbial degradation of organic matter or in certain industrial processes. The ability of this bacterium to utilize carbon monoxide may position it as a potential agent for bioremediation, particularly in environments contaminated with carbon-based pollutants. Overall, the characteristics of Pseudomonas carboxydohydrogena Z-1062 underscore its potential ecological contributions, particularly in carbon cycling and environmental cleanup. Further studies focusing on its metabolic pathways and ecological interactions could elucidate its role in microbial communities and environmental sustainability.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyNitrobacteraceae
GenusAfipia
SpeciesAfipia carboxydohydrogena
StrainZ-1062

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Pseudomonas carboxydohydrogena Z-1062
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas carboxydohydrogena Z-1062, Complete Genome

Gene Summary

Adenine Count

614120 bp

Thymine Count

614391 bp

Guanine Count

1021703 bp

Cytosine Count

1021226 bp

Genome Length

3271440 bp

Protein-coding Genes

3090 genes

Non-Coding Genes

71 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
gtpase obgeAFIC_003040B6JD21Positive3141185 - 314226138450.6
glutamate 5-kinaseAFIC_003041B6JD20Positive3142298 - 314347041097.4
glutamate-5-semialdehyde dehydrogenaseAFIC_003042B6JD19Positive3143616 - 314485743049.6
nicotinate-nucleotide adenylyltransferaseAFIC_003043A5E960Positive3144854 - 314547723342.3
ribosome silencing factorAFIC_003044Q5NLX3Positive3145616 - 314601114469.3
outer membrane beta-barrel proteinAFIC_003045P0A3U4Negative3146173 - 314689225341.5
helix-turn-helix domain-containing proteinAFIC_003046Q9Z3Q6Positive3147086 - 314804534712.6
23s rrna (pseudouridine(1915)-n(3))-methyltransferase rlmhAFIC_003047B6JD16Positive3148081 - 314856317795.4
peptidoglycan dd-metalloendopeptidase family proteinAFIC_003048P44864Positive3148575 - 314990647356.8
s41 family peptidaseAFIC_003049Q44879Positive3149903 - 315124947921.2

Displaying genes 3041 – 3050 of 3161 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.