Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxydohydrogena |
| Strain | Z-1062 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
614120 bp
Thymine Count
614391 bp
Guanine Count
1021703 bp
Cytosine Count
1021226 bp
Genome Length
3271440 bp
Protein-coding Genes
3090 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| translational gtpase typa | AFIC_000268 | P0A3B2 | Negative | 286962 - 288785 | 67130.1 |
| abc transporter substrate-binding protein | AFIC_000269 | P0A3T3 | Negative | 288955 - 290370 | 50495.6 |
| 4a-hydroxytetrahydrobiopterin dehydratase | AFIC_000270 | B6JAT9 | Positive | 290535 - 290837 | 10840.8 |
| ykva family protein | AFIC_000271 | O31670 | Positive | 290923 - 291300 | 13818.5 |
| invasion associated locus b family protein | AFIC_000272 | Not Available | Positive | 291442 - 292086 | 22506.9 |
| 23s rrna (adenine(2503)-c(2))-methyltransferase rlmn | AFIC_000273 | A5E8P3 | Positive | 292221 - 293432 | 45021.3 |
| hypothetical protein | AFIC_000274 | Not Available | Positive | 293501 - 293983 | 17107.2 |
| phosphatase pap2 family protein | AFIC_000275 | A0Q4N6 | Positive | 293980 - 294765 | 28939.5 |
| glycosyltransferase family 39 protein | AFIC_000276 | Q1MLH5 | Positive | 294762 - 296261 | 54057.5 |
| argininosuccinate synthase | AFIC_000277 | B6JAT0 | Positive | 296396 - 297733 | 49227.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
