Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxydohydrogena |
| Strain | Z-1062 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
614120 bp
Thymine Count
614391 bp
Guanine Count
1021703 bp
Cytosine Count
1021226 bp
Genome Length
3271440 bp
Protein-coding Genes
3090 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acetate--coa ligase family protein | AFIC_002500 | O29057 | Negative | 2593055 - 2595178 | 74661.3 |
| acyl-coa dehydrogenase | AFIC_002501 | Q2KHZ9 | Negative | 2595222 - 2596397 | 42998.9 |
| abc transporter substrate-binding protein | AFIC_002502 | Not Available | Negative | 2596493 - 2597527 | 37860.0 |
| abc transporter substrate-binding protein | AFIC_002503 | Not Available | Negative | 2597566 - 2598576 | 36599.1 |
| 3-oxoadipyl-coa thiolase | AFIC_002504 | P0C7L2 | Negative | 2598656 - 2599858 | 41763.0 |
| 3-hydroxyacyl-coa dehydrogenase | AFIC_002505 | P76083 | Negative | 2599885 - 2601411 | 54669.9 |
| lysr substrate-binding domain-containing protein | AFIC_002506 | Q9EXL7 | Positive | 2601620 - 2602516 | 34316.0 |
| duf202 domain-containing protein | AFIC_002507 | P0ADM2 | Positive | 2602783 - 2603187 | 14926.3 |
| duf202 domain-containing protein | AFIC_002508 | Not Available | Positive | 2603202 - 2603522 | 11101.9 |
| aspartate 1-decarboxylase | AFIC_002509 | Q9AMS6 | Negative | 2603720 - 2604067 | 12456.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
