Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxydohydrogena |
| Strain | Z-1062 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
614120 bp
Thymine Count
614391 bp
Guanine Count
1021703 bp
Cytosine Count
1021226 bp
Genome Length
3271440 bp
Protein-coding Genes
3090 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AFIC_002440 | Not Available | Positive | 2524146 - 2524364 | 7923.75 |
| lytic murein transglycosylase | AFIC_002441 | P41052 | Negative | 2524375 - 2525559 | 43625.1 |
| tigr00645 family protein | AFIC_002442 | P57929 | Negative | 2525702 - 2526286 | 21407.7 |
| trans-aconitate 2-methyltransferase | AFIC_002443 | Q6N3T8 | Negative | 2526404 - 2527174 | 29046.9 |
| energy-dependent translational throttle protein etta | AFIC_002444 | P9WQK2 | Negative | 2527182 - 2528831 | 61355.8 |
| nadp-specific glutamate dehydrogenase | AFIC_002445 | Q8RQP4 | Positive | 2529258 - 2530601 | 48764.2 |
| outer membrane beta-barrel protein | AFIC_002446 | P0A3U4 | Negative | 2530671 - 2531486 | 27966.6 |
| arac family transcriptional regulator | AFIC_002447 | Q9Z3Q6 | Positive | 2531683 - 2532654 | 35254.6 |
| l,d-transpeptidase family protein | AFIC_002448 | P39176 | Negative | 2532722 - 2533876 | 40589.5 |
| hypothetical protein | AFIC_002449 | Not Available | Positive | 2534194 - 2534823 | 21706.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
