Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxydohydrogena |
| Strain | Z-1062 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
614120 bp
Thymine Count
614391 bp
Guanine Count
1021703 bp
Cytosine Count
1021226 bp
Genome Length
3271440 bp
Protein-coding Genes
3090 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cca trna nucleotidyltransferase | AFIC_002400 | Q8K1J6 | Negative | 2485145 - 2486410 | 46226.8 |
| duf6111 family protein | AFIC_002401 | Not Available | Negative | 2486407 - 2486670 | 9456.77 |
| coa pyrophosphatase | AFIC_002402 | A4WBH1 | Negative | 2486667 - 2487374 | 26342.4 |
| duf1285 domain-containing protein | AFIC_002403 | Not Available | Negative | 2487371 - 2487982 | 22070.4 |
| moxr family atpase | AFIC_002404 | P94474 | Positive | 2488186 - 2489184 | 35515.0 |
| duf58 domain-containing protein | AFIC_002405 | P9WLX4 | Positive | 2489184 - 2490116 | 34071.5 |
| duf4159 domain-containing protein | AFIC_002406 | Not Available | Positive | 2490113 - 2492950 | 100632.0 |
| hypothetical protein | AFIC_002407 | Not Available | Positive | 2493126 - 2495192 | 74655.7 |
| hypothetical protein | AFIC_002408 | Not Available | Positive | 2495319 - 2495678 | 12203.6 |
| tonb-dependent receptor | AFIC_002409 | Q9JZN9 | Positive | 2495775 - 2498165 | 85033.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
