Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxydohydrogena |
| Strain | Z-1062 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
614120 bp
Thymine Count
614391 bp
Guanine Count
1021703 bp
Cytosine Count
1021226 bp
Genome Length
3271440 bp
Protein-coding Genes
3090 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ybhb/ybcl family raf kinase inhibitor-like protein | AFIC_002390 | P77368 | Positive | 2477212 - 2477712 | 17678.8 |
| cytochrome c1 | AFIC_002391 | P51131 | Negative | 2477779 - 2478564 | 28629.6 |
| cytochrome ubiquinol oxidase subunit i | AFIC_002392 | P51131 | Negative | 2478628 - 2479833 | 45312.8 |
| ubiquinol-cytochrome c reductase iron-sulfur subunit | AFIC_002393 | P51130 | Negative | 2479868 - 2480398 | 19024.6 |
| trna (cytidine(34)-2'-o)-methyltransferase | AFIC_002394 | B2IBT9 | Positive | 2480668 - 2481144 | 17180.6 |
| 7-carboxy-7-deazaguanine synthase | AFIC_002395 | Q89SC0 | Positive | 2481141 - 2481773 | 23062.5 |
| 6-carboxytetrahydropterin synthase | AFIC_002396 | P65871 | Positive | 2481926 - 2482294 | 13584.1 |
| oxygen-dependent coproporphyrinogen oxidase | AFIC_002397 | Q89SC2 | Positive | 2482305 - 2483192 | 33600.5 |
| autotransporter domain-containing protein | AFIC_002398 | P0A3U4 | Positive | 2483307 - 2484737 | 50378.8 |
| yodc family protein | AFIC_002399 | Not Available | Positive | 2484884 - 2485111 | 8135.22 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
