Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxydohydrogena |
| Strain | Z-1062 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
614120 bp
Thymine Count
614391 bp
Guanine Count
1021703 bp
Cytosine Count
1021226 bp
Genome Length
3271440 bp
Protein-coding Genes
3090 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyltransferase family 39 protein | AFIC_002370 | Not Available | Negative | 2455449 - 2456954 | 53596.9 |
| ribonuclease hii | AFIC_002371 | Q89S84 | Negative | 2457021 - 2457686 | 23573.5 |
| pa0069 family radical sam protein | AFIC_002372 | P9WL78 | Negative | 2457879 - 2459033 | 42694.3 |
| duf3551 domain-containing protein | AFIC_002373 | Not Available | Positive | 2459152 - 2459475 | 11418.1 |
| hypothetical protein | AFIC_002374 | Not Available | Positive | 2459633 - 2460205 | 19991.1 |
| molybdenum cofactor biosynthesis protein b | AFIC_002375 | P0AF00 | Negative | 2460207 - 2460764 | 19851.7 |
| neutral zinc metallopeptidase | AFIC_002376 | P64431 | Negative | 2460876 - 2461820 | 33383.4 |
| dna methyltransferase | AFIC_002377 | O30569 | Positive | 2462207 - 2463337 | 41622.9 |
| hypothetical protein | AFIC_002378 | Not Available | Negative | 2463407 - 2463880 | 16190.3 |
| glutathione s-transferase n-terminal domain-containing protein | AFIC_002379 | P0A9D3 | Negative | 2464000 - 2464626 | 23076.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
