Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxydohydrogena |
| Strain | Z-1062 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
614120 bp
Thymine Count
614391 bp
Guanine Count
1021703 bp
Cytosine Count
1021226 bp
Genome Length
3271440 bp
Protein-coding Genes
3090 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf3422 domain-containing protein | AFIC_002340 | Not Available | Positive | 2419961 - 2421289 | 49042.9 |
| hypothetical protein | AFIC_002341 | Not Available | Negative | 2421386 - 2421898 | 18514.2 |
| oxidoreductase | AFIC_002342 | Q3J6K9 | Negative | 2422021 - 2423007 | 34092.6 |
| quinolinate synthase nada | AFIC_002343 | C3M8U4 | Positive | 2423279 - 2424385 | 40789.4 |
| l-aspartate oxidase | AFIC_002344 | Q92R32 | Positive | 2424447 - 2426045 | 55034.7 |
| carboxylating nicotinate-nucleotide diphosphorylase | AFIC_002345 | P77938 | Positive | 2426042 - 2426929 | 30867.5 |
| cell wall hydrolase | AFIC_002346 | P59105 | Negative | 2426940 - 2428253 | 47091.3 |
| pyruvate, phosphate dikinase | AFIC_002347 | Q59754 | Negative | 2428618 - 2431518 | 104716.0 |
| duf3096 domain-containing protein | AFIC_002348 | Not Available | Negative | 2431692 - 2431838 | 5135.9 |
| duf1236 domain-containing protein | AFIC_002349 | Not Available | Positive | 2432051 - 2432407 | 12934.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
