Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxydohydrogena |
| Strain | Z-1062 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
614120 bp
Thymine Count
614391 bp
Guanine Count
1021703 bp
Cytosine Count
1021226 bp
Genome Length
3271440 bp
Protein-coding Genes
3090 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein | AFIC_002320 | P0A192 | Negative | 2404024 - 2404758 | 26672.2 |
| abc transporter atp-binding protein | AFIC_002321 | P0A194 | Negative | 2404755 - 2405507 | 27189.0 |
| branched-chain amino acid abc transporter permease | AFIC_002322 | P30296 | Negative | 2405504 - 2406460 | 34993.5 |
| branched-chain amino acid abc transporter permease | AFIC_002323 | P0A2J2 | Negative | 2406460 - 2407326 | 30710.0 |
| abc transporter substrate-binding protein | AFIC_002324 | Q2YLG0 | Negative | 2407473 - 2408738 | 45815.9 |
| hypothetical protein | AFIC_002325 | Not Available | Negative | 2408889 - 2409149 | 9802.2 |
| Trna-pro | Not Available | Not Available | Positive | 2409313 - 2409389 | Not Available |
| l-threonylcarbamoyladenylate synthase | AFIC_002327 | P39153 | Positive | 2409485 - 2410465 | 33507.4 |
| fad-binding oxidoreductase | AFIC_002328 | O23240 | Positive | 2410462 - 2411880 | 50176.7 |
| sos response-associated peptidase | AFIC_002329 | O34906 | Negative | 2411887 - 2412633 | 27403.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
